Broken Mirror

a Neon Genesis Evangelion fanfiction by Shanejayell

Prologue: The Road Beyond Instrumentality

Gendo Ikari lowered the gun, watching Ritsuko Akagi fall dying to the 
floor, splashing in the LCL fluid spilling there. He felt a small flash 
of regret, more for what might have been than what he was doing, then 
the brown haired man turned away, knowing what he had to do.

Rei Ayanami waited there patiently, nude, gazing at him with empty eyes 
as the blue haired nude girl seemed to almost hang in mid air. Her red 
eyes seemed to peer right through Gendo, somehow, even though he knew 
that the only thing guiding her was the programing he implanted.

Pulling off his while gloves to reveal the Adam entity implanted in his 
palm Gendo stepped up only to freeze as Rei suddenly moved. Her hand 
shot up to grab him by the front of his Nerv uniform, holding him off 
easily.

"Rei...?" Gendo gasped.

"No," the eerily familiar voice said.

"Yui," Gendo's eyes went wide with a unholy combination of joy and fear.

Yui Ikari looked at him with a blank expression, but her true emotions 
swam in her startling red eyes. With a almost limitless contempt she 
asked, "Even with my soul in the Evangelion, did you not think I 
wouldn't be aware of what was going on?"

"I just wanted," Gendo said weakly, "you back."

"I went into Evangelion for a reason," Yui's voice was without mercy as 
she continued, "or did you just not care anymore?" Moving with a eerie 
sort of grace she took his hand in hers, then the Adam entity implanted 
there seemed to wiggle free, leaping to her as Gendo staggered away with 
a cry.

"Don't do this," Gendo begged, finally realizing what her intentions 
might be.

"Memory and consciousness is a strange thing," Yui looked down at her 
hands as the Adam entity flowed into her substance, "who knew that a few 
strands on RNA and DNA could hold so much? I remember it all, in this 
final moment."

"All?" Gendo felt his stomach drop.

"Naoko Akagi," Yui was coldly angry, "Ritsuko. The betrayal of my hopes 
and dreams, and the betrayal of everyone else."

"Please, Yui," Gendo begged from where he knelt in a puddle of LCL.

"It's over, Gendo," Yui turned away from him to where the Lilith entity 
was trapped on it's cross and floated towards it. There was but a 
moment's hesitation, then she seemed to flow into it like water.

"What have I done?" Gendo cluched his now Adam-less palm to his chest, 
his glasses half falling off his face.

Even as the Lilith entity shifted, it's body visibly reshaping itself, 
she tore free of the massive cross she was bound to, inhuman features 
rapidly becoming something much more pleasant. Absorbing any available 
LCL it shifted, growing and in a moment it had become a perfect replica 
of Yui, but on a immense scale.

"Goodbye, Gendo," Yui said as she seemed to ascend, rising towards the 
roof, "I'd wish you good luck, but there seems little point."

Ascending through NERV Yui got a sense of the chaos, seeing the United 
Nations forces battling against NERV troops and staff, the dead and 
dying. A rage kindled in her as she reached the surface, seeing first 
hand the actions of SEELE.

Asuka Soryu Langley's Unit 02 was torn to shreds, the pilot laying 
somewhere in the wreckage. The girl's mind was nearly broken from the 
trauma, only the last of her will keeping her from breaking down 
completely.

High up in the air Yui's son Shinji Ikari was trapped by the mass 
production models of Evangelion, his Unit 01 held captive like a fly in 
amber. Unlike the hardier Asuka he had finally broken, retreating from 
reality into a dream world of his own making.

Turning away from them Yui set to work, sending out pices of her spirit 
and essence out to the survivors. Ghost like these Rei copies passed 
through walls and obstacles, reaching each person and manifesting as 
their greatest wish or desire. As each individual fell they reverted to 
LCL, their souls freed for the next step.

Drawing from the earth the Egg of Lilith Yui drew the souls in even as 
she reached out to Unit 01 and the last part of herself. Taking that in 
she was whole for the first time in a age, cradling the now nearly 
catatonic Shinji in her hands. With a mixture of pity and tenderness she 
reduced him to LCL too, combining his soul with the rest of humanity.

This was it... the opportunity to return humanity to the Garden, to 
innocence... so why was she hesitating? Raising the Lilith Egg to her 
face she realized she could feel the souls within, and a few that cried 
out over the mass of humanity.

'This can't be the end,' Makoto Hyuuga struggled desperately.

'Sempai, I always wanted...,' Maya Ibuki grieved softly.

'I don't want to be alone,' Misato Katsuragi sounded fierce, 'but not 
like THIS.'

'I'm not giving up,' Shigeru Aoba fought on.

'Damn you, you are NOT hurting my sister,' Toji Suzuhara vowed.

Yui felt shock and even surprise as she turned the sphere of souls in 
her hands, hearing the voices of so many beings crying out against the 
unison. She had entered the Instrumentality project herself feeling that 
this was the best hope for all their children, that it could even be the 
begining of a new age.

Was she wrong?

Turning from those voices Yui Ikari reached out, seeking a certain voice 
and found only silence waiting for her. Shinji Ikari had simply pulled 
back into himself, torn away even from Instrumentality to hide away 
within the corridors of his own mind, the horrors that he had 
experienced too much for him.

"Oh my son," Yui murmured, "what have I done?"

'Then make it better, baka!' the voice demanded furiously.

'You?' Yui felt rather than saw the furious red-brown haired young 
woman, dressed in her red plugsuit.

Asuka Langley Soryu faced Yui directly, a mortal unaffraid in the face 
of something very like a god. 'I understand what's going on,' Asuka said 
defiantly, 'this... group mind-soup we're in told me that.'

'So what is going on, Asuka?" Yui challenged the younger woman.

'We can still go back,' Asuka said fiercely, 'the LCL is still there, we 
just need to put our wills into it. But first YOU have to let us go.'

'You have been hurt, betrayed, even killed by others, Asuka,' Yui mused, 
'isn't this unity a better thing for all?'

'No,' Asuka said flatly.

'And why not?' Yui looked curious.

'A life without pain is death,' Asuka looked pained as she remembered 
her biological mother and added, 'or worse, insanity.' She seemed to 
take a breath, 'Even with the pain I've been through, the friendships 
make it worth it. Misato, that baka Toji, Hikaru even Shinji... I'm glad 
to have known them.'

'The world is in ruins,' Yui pointed out reasonably, yet still feeling 
the younger woman winning her over.

'I'd kind of think you could fix that, too,' Asuka noted, looking over 
the giant being, blazing with unearthly power.

Drawing her mind away from Asuka she looked across the now gutted 
wreckage of a world as Yui carefully weighed her words, as well as the 
wants of all those within the Egg of Lilith. Finally, it came down to 
humanity... the human soul within herself and the ones trapped inside 
the Egg. Raising the Egg of Lilith she focused her will and it seemed to 
almost explode as the souls within screamed free, racing back to their 
bodies.

"I don't have much time," Yui murmured.

Drawing on all her power the Yui/Lilith/Adam entity began to shrink, 
glowing brighter and brighter as energies built up within her. Weilding 
a power only slightly less than a god's Yui Ikari reached out, and the 
world...

...changed.

0o0o0o0o0o0o0

Yui Ikari awoke to the buzzing of her alarm, the light haired woman 
hitting it till it was silent. With a groan she got up, stumbling into 
the kitchen to start up the coffee. She frowned faintly, the fragments 
of a disturbing dream at the edges of her mind, but she dismissed it as 
nothing important.

To be continued...

Notes: Yui's consciousness only became active in the Rei body in 
Terminal Dogma with Gendo there. She was NOT having incestuous thoughts 
about Shinji throughout the TV series, tho BOY would that add a creepy 
little dynamic to the show.

"Hi, my name's Rei Ayanami. I am NOT your mother despite bearing a eerie 
resemblance to her and I am not thinking of having hot monkey-sex with 
my son."

Shinji, dumb as post, "Hi, nice to meet you."

lol This is, basically, a explanation for the AU universe of Broken 
Mirror and how it became so different than Eva. AS to why Yui would 
arrange that world in the way she did, consider that she had access to 
everyone's minds & souls while they were within the Egg of Lilith. That, 
and she might have wanted her own happy ending too.

----------

Ritsuki Akagi intently studied the figure that was floating in the clear 
plastic tube, the blonde haired scientist frowning to herself slightly 
as she reviewed the data on display. Underneath her white lab coat she 
wore the form fitting uniform of a NERV officer, stone grey cloth 
trimmed in red, her stance and posture intent.

Within the clear plastic tube a young man floated fast asleep, light 
blue hair flowing around an average face. He was physically 
unremarkable, face unmarked by strain and almost unearthly in it's 
innocence. Designated Shinji Ayanami he was the greatest hope for NERV, 
and the weapon who would be pointed at the coming Angel threat.. at 
least hopefully.

The door to the chamber swished open and the leader of NERV walked up 
behind her, "How is the experiment going?"

Ritsuko turned around to look at Yui Ikari, meeting the gaze of the 
beautiful brown haired woman who was standing there. Like Ritsuko she 
too wore a labcoat but her uniform was colored dark blue, the insignia 
on her collar marking her as the commander of the underground facility 
of Tokyo-2. More importantly this project she commanded could very well 
be the final line of defence for humanity against a alien invasion.

"Not as well as we'd hoped," Ritsuko admitted. Gesturing towards Shinji 
she said, "We created him using genetic samples from your dead husband 
Gendo and the Adam entity, but our experiments show that he is limited 
in his ability to control Evanelion."

"We'll have to manage," Yui said quietly, "I have no wish to see 
ordinary children endangered in piloting Evangelion."

Ritsuko hesitated then she reached out a hand to rest on Yui's arm as 
she said seriously, "We may have no choice but to use the pilot 
trainees, Yui. I seriously doubt that a Shinji will be able to survive 
long fighting against the Angels."

Tensely Yui shrugged off the hand as she growled, "He'll have to." 
Without another word she strode out of the room, back stiff and steps 
fast.

Taken from the private journals of Yui Ikari:

Sometimes I hate my husband Gendo, even though he is long dead. Our 
expedition to investigate the Adam entity in Antarctica was peaceful, 
our plans perfect.. or at least that's what my arrogant spirit likes to 
believe. Somehow Gendo interfered with the Adam entity... and something 
catastrophic happened: Second Impact.

The research station was destroyed with nearly with all hands, the polar 
ice caps melted, and around the world humans died in mind boggling 
numbers. I still don't know who tossed Misato Katsuragi and myself into 
an escape capsule, both of us coming to rest on a island not far from 
the base. Frantically I fought to keep the badly injured Misato alive, 
staunching her blood flow and bandanging her chest wound even as tears 
flowed down my face...

"Commander," Misato called, the black haired young woman jogging up to 
her side. Unlike Yui she didn't wear a uniform, instead she was dressed 
in casual clothes with the rank insignia of a captain clipped onto her 
jacket.

"Misato," Yui smiled slightly as they fell into step together, looking 
at the young lady that she had nearly adopted. In the aftermath of 
Second Impact they had been thrown together by their mutual losses, 
developing a unlikely but strong bond.

"Are you looking forward to seeing your daughter?" Misato asked 
curiously, smiling up at the slightly taller Yui.

"Sort of," Yui admitted, smiling a bit grimly, "it's been months since I 
was able to visit Rei, but the idea of her coming here scares me."

Misato smiled at her, reaching out to gently squeeze her arm. "Rei wants 
to see her mom," she said to her softly, "understandably so. I know that 
your relatives have been taking care of her, but she must miss you."

They reached one of the elevators and went inside, each pressing a key 
for a different floor. "I wish I could get away from here to go see 
her," Yui closted her eyes a moment, rubbing at them tiredly, "but 
there's just no way."

"Well, would you feel a bit better if I went out to get her when she 
hits town?" Misato offered her help gently.

"I couldn't ask you..." Yui trailed off.

Misato chuckled softly, "You didn't ask, I offered." She smiled, "Rei is 
a good kid and we're friends. I'd be glad to help."

Yui gave her a lopsided grin, "Thanks." She gave her a mildly impish 
look, "Are you still seeing that ne'er do well, Kaji?"

"Yui!" Misato blushed faintly.

Yui looked amused, "I assume he must be good in the sack, considering 
he's lasted longer than most of your other boyfriends."

"Gah," Misato stepped out of the elevator fast once they reached her 
floor, her cheeks red. "I can't believe we're having this conversation," 
she shook her head grinning.

"See you later," Yui said as the door closed.

From the private journals of Yui Ikari:

In the aftermath of Second Impact I could barely look at little Rei, now 
barely a few weeks old. Her black hair reminded me so much of her father 
Gendo, but her eyes were purely innocent in a way that his had never 
been. She helped pull me through all the pain and grief I felt due to my 
role in Second Impact, spending my time with her and Misato even as I 
opened up negotiations with the United Nations.

It was clear to everyone that if there was a Third Impact humanity 
wouldn't survive, and so NERV was founded to research the earlier 
Impacts and attempt to prepare a possible defence. In studying Adam and 
other sources I created the biomechanical being Evangelion... in some 
ways a complete perversion of my earlier work. I dreamed of healing the 
body with synthetic parts, but instead I have created a engine of 
destruction.

Making things more complicated has been the discovery of encrypted files 
belongig to Gendo detailing his involvement with something called SEELE. 
At the very least they were aware of both Adam and our expedition to 
contact it, and possibly they may have even financed our trip. If it's 
true they may have played a hand in Gendo triggering Second Impact, and 
hints in the documents indicate they might be pulling strings in 
governments around the world...

In her office later that day Yui closed the data file, silently musing 
on all the twists that had come to her life. The sound of a chime got 
her attention away from her journal and she closed the file as Yui 
called out, "Come in."

Maya Ibuki nodded respectfully as the young officer set her report on 
the table. Her black hair fell into her eyes as she reported formally, 
"The command center is fully online, ma'am, and the city defences report 
fully operational."

'She's so formal,' Yui noted. "Thank you, Maya," she said as she took 
the documents, "you've done excelent work."

"Ritsuko-sempai did the difficult work," Maya's eyes nearly shone, 
"completing the computer integration with the Magi."

Yui fought back her amusement at the young lady's hero worship as she 
agreed, "Yes, Ritsuko really is something." She studied Maya a moment, 
"As you know, we're going to need reliable officers in the comand center 
when the Angels attack... would you be interested in such a position?"

Maya saluted, "Ma'am, I'd be honored."

'Especially since it means you'll be working closely with Ritsuko,' Yui 
thought impishly. "The with your permission we'll switch you over from 
technical services," she stood to shake the girl's hand, "welcome 
aboard."

"Ma'am," Maya nodded happily, clearly fighting back a skip in her step 
as she left.

A few moments later the door swished open once again and Yui smiled 
faintly as her guest came inside. "I'm sorry for being so short with you 
this morning," she apologized, getting up from behind her desk.

"It's all right," Ritsuko smiled as she took Yui's hand and squeezed it 
gently, "I understand. You wouldn't be the person you are if you didn't 
want to keep anyone else from being hurt."

"Thank you," Yui delicately took Ritsuko's hand in both of hers. She 
smiled slightly as she met Ritsuko's eyes, " I think Maya has a crush on 
you."

Ritsuko stepped closer, her eyes gently amused. "I noticed," she 
admitted as shestood bare inches from Yui, "I'm trying to let her down 
gently."

Yui swallowed, her breath coming a little faster. "Ritsuko...," she 
started.

"Hush," Ritsuko leaned forward, closing the distance to press her lips 
to Yui's, slinding her free hand behind the other woman's head.

Yui moaned as they drew apart a bit, her own hands having slipped free 
from Ritsuko's to slide around the other woman's body. "I'm your 
commanding officer," Yui sighed, "we shouldn't be doing this."

"I'm a grown woman," Ritsuko said, keeping a firm grip on Yui, "and I 
was the one who approached you, remember?"

"That doesn't excuse me," Yui sighed.

Ritsuko smirked, "I wasn't looking for excuses." And with that she 
gently pulled her into a kiss once again.

End.

Notes: This was inspired by a comment that there weren't enough Yui 
Ikari fics, so I decided to try to write one. The premise is an 
alternate EVA where Gendo died instead of Yui, and it looks at the way 
things might have gone afterward. I've left this deliberately open ended 
so that I or other authors could continue it later...

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